[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: begin
Target surface form: began
Context:
His was one of two research teams in 1984 to report dual chromosome losses for a rare childhood cancer of the kidney called Wilm's tumor. Dr. Vogelstein next turned his attention colon cancer, the second biggest cancer killer in the U.S. after lung cancer. He believed colon cancer might also arise from multiple "hits "on cancer suppressor genes, because it often seems to develop in stages. It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They <t>began</t> uncovering a confusing variety of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant cells. Gradually, a coherent picture of cancer development emerged.

Candidate senses:
1. sense_key=begin%2:30:00:: | definition=take the first step or steps in carrying out an action | synonyms=get down, get, start out, start, set about, set out | examples=We began working at dawn; Who will start?
2. sense_key=begin%2:42:00:: | definition=have a beginning, in a temporal, spatial, or evaluative sense | synonyms=start | examples=The DMZ begins right over the hill; The second movement begins after the Allegro
3. sense_key=begin%2:30:01:: | definition=set in motion, cause to start | synonyms=lead off, start, commence | examples=The U.S. started a war in the Middle East; The Iraqis began hostilities
4. sense_key=begin%2:32:03:: | definition=begin to speak or say;  he began | examples=Now listen, friends,
5. sense_key=begin%2:42:02:: | definition=be the first item or point, constitute the beginning or start, come first in a series | examples=The number `one' begins the sequence; A terrible murder begins the novel
6. sense_key=begin%2:42:04:: | definition=have a beginning, of a temporal event | examples=WW II began in 1939 when Hitler marched into Poland; The company's Asia tour begins next month
7. sense_key=begin%2:42:03:: | definition=have a beginning characterized in some specified way | synonyms=start | examples=The novel begins with a murder; My property begins with the three maple trees
8. sense_key=begin%2:41:04:: | definition=begin an event that is implied and limited by the nature or inherent function of the direct object | synonyms=start | examples=begin a cigar; She started the soup while it was still hot
9. sense_key=begin%2:41:00:: | definition=achieve or accomplish in the least degree, usually used in the negative | examples=This economic measure doesn't even begin to deal with the problem of inflation; You cannot even begin to understand the problem we had to deal with during the war
10. sense_key=begin%2:32:04:: | definition=begin to speak, understand, read, and write a language | examples=She began Russian at an early age; We started French in fourth grade

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content:
The target word is "began" in the context: "They began uncovering a confusing variety of genetic deletions..."

Let me analyze the context. "They began uncovering a confusing variety of genetic deletions" - this means they started the action of uncovering. This is about taking the first step in carrying out an action.

Sense 1: "take the first step or steps in carrying out an action" - examples: "We began working at dawn" - This fits well. "They began uncovering" is similar to "We began working."

Sense 2: "have a beginning, in a temporal, spatial, or evaluative sense" - This is more about something beginning in time/space, not an action being started by someone.

Sense 3: "set in motion, cause to start" - This is transitive, causing something else to start. Not quite right here.

Sense 6: "have a beginning, of a temporal event" - This is about events having a beginning in time, like "WW II began in 1939."

Sense 7: "have a beginning characterized in some specified way" - "The novel begins with a murder" - Not quite right.

The context is "They began uncovering..." - this is about them starting an action (uncovering). Sense 1 fits best: "take the first step or steps in carrying out an action" with the example "We began working at dawn."

So the answer is sense_index 1.


attempt_kind: initial

status: success

[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: confusing
Target surface form: confusing
Context:
His was one of two research teams in 1984 to report dual chromosome losses for a rare childhood cancer of the kidney called Wilm's tumor. Dr. Vogelstein next turned his attention colon cancer, the second biggest cancer killer in the U.S. after lung cancer. He believed colon cancer might also arise from multiple "hits "on cancer suppressor genes, because it often seems to develop in stages. It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a <t>confusing</t> variety of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant cells. Gradually, a coherent picture of cancer development emerged.

Candidate senses:
1. sense_key=confusing%5:00:00:disorienting:00 | definition=causing confusion or disorientation | examples=a confusing jumble of road signs; being hospitalized can be confusing and distressing for a small child
2. sense_key=confusing%5:00:00:unclear:00 | definition=lacking clarity of meaning; causing confusion or perplexity | synonyms=perplexing, puzzling | examples=sent confusing signals to Iraq; perplexing to someone who knew nothing about it

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

finish_reason: stop

role: assistant

reasoning_content:
The context describes a "confusing variety of genetic deletions" found during research. The deletions were various and complex, existing in different combinations (benign polyps, malignant cells, both). This variety was hard to make sense of initially, until "a coherent picture of cancer development emerged."

Sense 1: causing confusion or disorientation. Example: "a confusing jumble of road signs" - this matches "a confusing variety" well, as it's about a jumble/variety that is disorienting.
Sense 2: lacking clarity of meaning; causing confusion or perplexity. Synonyms: perplexing, puzzling. Example: "sent confusing signals" - this is more about unclear meaning.

The phrase "confusing variety of genetic deletions" is similar to "confusing jumble of road signs" (Sense 1). It's about a bewildering array/jumble rather than something lacking clarity of meaning. The variety itself is disorienting/confusing because there are so many different deletions in different combinations.

I'll go with Sense 1.

format: unknown

native_finish_reason: stop

provider: StreamLake

currency: USD


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: variety
Target surface form: variety
Context:
His was one of two research teams in 1984 to report dual chromosome losses for a rare childhood cancer of the kidney called Wilm's tumor. Dr. Vogelstein next turned his attention colon cancer, the second biggest cancer killer in the U.S. after lung cancer. He believed colon cancer might also arise from multiple "hits "on cancer suppressor genes, because it often seems to develop in stages. It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing <t>variety</t> of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant cells. Gradually, a coherent picture of cancer development emerged.

Candidate senses:
1. sense_key=variety%1:14:01:: | definition=a collection containing a variety of sorts of things | synonyms=assortment, mixture, mixed bag, miscellany, miscellanea, salmagundi | examples=a great assortment of cars was on display; he had a variety of disorders
2. sense_key=variety%1:07:00:: | definition=noticeable heterogeneity | synonyms=diverseness, diversity, multifariousness | examples=a diversity of possibilities; the range and variety of his work is amazing
3. sense_key=variety%1:14:00:: | definition=(biology) a taxonomic category consisting of members of a species that differ from others of the same species in minor but heritable characteristics | examples=varieties are frequently recognized in botany
4. sense_key=variety%1:10:00:: | definition=a show consisting of a series of short unrelated performances | synonyms=variety show
5. sense_key=variety%1:09:01:: | definition=a category of things distinguished by some common characteristic or quality | synonyms=kind, sort, form | examples=sculpture is a form of art; what kinds of desserts are there?
6. sense_key=variety%1:07:01:: | definition=a difference that is usually pleasant | synonyms=change | examples=he goes to France for variety; it is a refreshing change to meet a woman mechanic

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content:
The context describes uncovering "a confusing variety of genetic deletions" - multiple different types of genetic deletions (some in benign polyps, others in malignant cells, many in both). This is about a collection containing different sorts of things - an assortment.

Sense 1: "a collection containing a variety of sorts of things" with examples "a great assortment of cars" and "he had a variety of disorders" - this fits well. The genetic deletions are a collection of different types.

Sense 2: "noticeable heterogeneity" - this could also fit, emphasizing the diversity aspect.

Looking more carefully: "a confusing variety of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant cells" - this is describing a collection of different sorts of genetic deletions. The emphasis is on there being many different kinds/types in a collection.

Sense 1's example "he had a variety of disorders" is very similar in structure to "a confusing variety of genetic deletions" - both describe a collection of different medical/genetic things.

Sense 2 emphasizes heterogeneity/diversity as an abstract quality, while sense 1 emphasizes a collection containing different sorts of things.

The phrase "a confusing variety of genetic deletions" - the deletions themselves form a collection with different sorts. This aligns with sense 1.

I'll go with sense 1.


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: genetic
Target surface form: genetic
Context:
His was one of two research teams in 1984 to report dual chromosome losses for a rare childhood cancer of the kidney called Wilm's tumor. Dr. Vogelstein next turned his attention colon cancer, the second biggest cancer killer in the U.S. after lung cancer. He believed colon cancer might also arise from multiple "hits "on cancer suppressor genes, because it often seems to develop in stages. It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of <t>genetic</t> deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant cells. Gradually, a coherent picture of cancer development emerged.

Candidate senses:
1. sense_key=genetic%5:00:00:inheritable:00 | definition=occurring among members of a family usually by heredity | synonyms=familial, hereditary, inherited, transmitted, transmissible | examples=an inherited disease; familial traits
2. sense_key=genetic%3:01:02:: | definition=of or relating to or produced by or being a gene | synonyms=genic, genetical | examples=genic combinations; genetic code
3. sense_key=genetic%3:01:01:: | definition=pertaining to or referring to origin | examples=genetic history reconstructs the origins of a literary work
4. sense_key=genetic%3:01:00:: | definition=of or relating to the science of genetics | synonyms=genetical | examples=genetic research

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content:
The context is about "genetic deletions" in chromosomes, related to cancer research, genes, and DNA damage.
Sense 1: occurring among members of a family usually by heredity.
Sense 2: of or relating to or produced by or being a gene. (genic combinations; genetic code)
Sense 3: pertaining to or referring to origin.
Sense 4: of or relating to the science of genetics. (genetic research)

The context mentions: "probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions"
"genetic deletions" refers to deletions of genes or relating to genes.
Sense 2: "of or relating to or produced by or being a gene" fits best because "genetic deletions" means deletions of genes or in genes. Wait, it could also mean deletions related to the science of genetics (Sense 4), but Sense 2 specifically mentions "gene", and the text talks about "genes", "chromosomes".
Let's look closely at Sense 2: "of or relating to or produced by or being a gene". Synonyms: genic, genetical.
Let's look at Sense 4: "of or relating to the science of genetics". Synonyms: genetical. Examples: genetic research. The text mentions "research teams" and "genetic damage". Wait, "genetic damage" refers to damage to the genes or DNA.
So Sense 2 seems more appropriate for "genetic damage" and "genetic deletions".
Let's check the options:
1: genetic%5:00:00:inheritable:00
2: genetic%3:01:02:: | of or relating to or produced by or being a gene
3: genetic%3:01:01:: | pertaining to or referring to origin
4: genetic%3:01:00:: | of or relating to the science of genetics

In the context of "genetic deletions", it means deletions of genes. Sense 2 fits perfectly. "of or relating to or produced by or being a gene".

Wait, could "genetic damage" mean "damage to genes"? Yes.
Let me double check WordNet senses.
genetic (adj)
1: occurring among members of a family usually by heredity; "an inherited disease"; "familial traits"
2: of or relating to or produced by or being a gene; "genic combinations"; "genetic code"
3: pertaining to or referring to origin; "genetic history reconstructs the origins of a literary work"
4: of or relating to the science of genetics; "genetic research"

The text refers to genes, chromosomes, cancer suppressor genes. So "genetic damage" means damage to genes. So Sense 2 is the right choice.
Sense 2 is indexed as 2.

provider: Baidu


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: exist
Target surface form: existing
Context:
His was one of two research teams in 1984 to report dual chromosome losses for a rare childhood cancer of the kidney called Wilm's tumor. Dr. Vogelstein next turned his attention colon cancer, the second biggest cancer killer in the U.S. after lung cancer. He believed colon cancer might also arise from multiple "hits "on cancer suppressor genes, because it often seems to develop in stages. It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions, some <t>existing</t> only in benign polyps, others in malignant cells and many in both polyps and malignant cells. Gradually, a coherent picture of cancer development emerged.

Candidate senses:
1. sense_key=exist%2:42:00:: | definition=have an existence, be extant | synonyms=be | examples=Is there a God?
2. sense_key=exist%2:42:01:: | definition=support oneself | synonyms=survive, live, subsist | examples=he could barely exist on such a low wage; Can you live on $2000 a month in New York City?

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content:
The context describes genetic deletions that "exist" only in benign polyps, others in malignant cells, etc. The word "existing" here means "being present" or "having an existence" - referring to the presence of these genetic deletions in different types of cells.

Sense 1: "have an existence, be extant" - this fits because the genetic deletions are present/exist in certain cells.
Sense 2: "support oneself" - this is about surviving/living on something, like existing on a low wage. This doesn't fit at all.

The answer is sense 1.


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: only
Target surface form: only
Context:
His was one of two research teams in 1984 to report dual chromosome losses for a rare childhood cancer of the kidney called Wilm's tumor. Dr. Vogelstein next turned his attention colon cancer, the second biggest cancer killer in the U.S. after lung cancer. He believed colon cancer might also arise from multiple "hits "on cancer suppressor genes, because it often seems to develop in stages. It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions, some existing <t>only</t> in benign polyps, others in malignant cells and many in both polyps and malignant cells. Gradually, a coherent picture of cancer development emerged.

Candidate senses:
1. sense_key=only%4:02:02:: | definition=and nothing more | synonyms=merely, simply, just, but | examples=I was merely asking; it is simply a matter of time
2. sense_key=only%4:02:01:: | definition=without any others being included or involved | synonyms=entirely, exclusively, solely, alone | examples=was entirely to blame; a school devoted entirely to the needs of problem children
3. sense_key=only%4:02:00:: | definition=with nevertheless the final result | examples=He arrived only to find his wife dead; We won only to lose again in the next round
4. sense_key=only%4:02:04:: | definition=in the final outcome | examples=These news will only make you more upset
5. sense_key=only%4:02:06:: | definition=except that | examples=It was the same story; only this time she came out better
6. sense_key=only%4:02:03:: | definition=never except when | synonyms=only if, only when | examples=call me only if your cold gets worse
7. sense_key=only%4:02:05:: | definition=as recently as | examples=I spoke to him only an hour ago

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content:
The target word is "only" in the sentence: "They began uncovering a confusing variety of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant cells."

Let's analyze the context: "some existing only in benign polyps". This means that some genetic deletions existed exclusively in benign polyps and not elsewhere. The word "only" here means "without any others being included or involved" or "exclusively".

Let's look at the candidate senses:
1. only%4:02:02:: - "and nothing more" - synonyms: merely, simply, just, but - examples: "I was merely asking; it is simply a matter of time"
2. only%4:02:01:: - "without any others being included or involved" - synonyms: entirely, exclusively, solely, alone - examples: "was entirely to blame; a school devoted entirely to the needs of problem children"
3. only%4:02:00:: - "with nevertheless the final result" - examples: "He arrived only to find his wife dead"
4. only%4:02:04:: - "in the final outcome"
5. only%4:02:06:: - "except that"
6. only%4:02:03:: - "never except when" - synonyms: only if, only when
7. only%4:02:05:: - "as recently as"

The context "some existing only in benign polyps" means that these genetic deletions exist exclusively in benign polyps (and not in malignant cells). This matches sense 2, which means "without any others being included or involved" with synonyms like "exclusively, solely".

So the answer is sense_index 2.


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: polyp
Target surface form: polyps
Context:
His was one of two research teams in 1984 to report dual chromosome losses for a rare childhood cancer of the kidney called Wilm's tumor. Dr. Vogelstein next turned his attention colon cancer, the second biggest cancer killer in the U.S. after lung cancer. He believed colon cancer might also arise from multiple "hits "on cancer suppressor genes, because it often seems to develop in stages. It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions, some existing only in benign <t>polyps</t>, others in malignant cells and many in both polyps and malignant cells. Gradually, a coherent picture of cancer development emerged.

Candidate senses:
1. sense_key=polyp%1:26:00:: | definition=a small vascular growth on the surface of a mucous membrane | synonyms=polypus
2. sense_key=polyp%1:05:00:: | definition=one of two forms that coelenterates take (e.g. a hydra or coral): usually sedentary with a hollow cylindrical body usually with a ring of tentacles around the mouth | examples=in some species of coelenterate, polyps are a phase in the life cycle that alternates with a medusoid phase

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content:
The context discusses colon cancer, bowel, benign polyps, malignant cells, and genetic damage. Polyps here refer to abnormal growths on the mucous membrane of the colon/bowel.

Sense 1: "a small vascular growth on the surface of a mucous membrane" - this fits the medical context of colon polyps.
Sense 2: "one of two forms that coelenterates take" - this is a biological/zoological sense referring to coral or hydra, not relevant here.

The correct sense is 1.


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: cell
Target surface form: cells
Context:
His was one of two research teams in 1984 to report dual chromosome losses for a rare childhood cancer of the kidney called Wilm's tumor. Dr. Vogelstein next turned his attention colon cancer, the second biggest cancer killer in the U.S. after lung cancer. He believed colon cancer might also arise from multiple "hits "on cancer suppressor genes, because it often seems to develop in stages. It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions, some existing only in benign polyps, others in malignant <t>cells</t> and many in both polyps and malignant cells. Gradually, a coherent picture of cancer development emerged.

Candidate senses:
1. sense_key=cell%1:06:03:: | definition=any small compartment | examples=the cells of a honeycomb
2. sense_key=cell%1:03:00:: | definition=(biology) the basic structural and functional unit of all organisms; they may exist as independent units of life (as in monads) or may form colonies or tissues as in higher plants and animals
3. sense_key=cell%1:06:00:: | definition=a device that delivers an electric current as the result of a chemical reaction | synonyms=electric cell
4. sense_key=cell%1:14:00:: | definition=a small unit serving as part of or as the nucleus of a larger political movement | synonyms=cadre
5. sense_key=cell%1:06:04:: | definition=a hand-held mobile radiotelephone for use in an area divided into small sections, each with its own short-range transmitter/receiver | synonyms=cellular telephone, cellular phone, cellphone, mobile phone
6. sense_key=cell%1:06:02:: | definition=small room in which a monk or nun lives | synonyms=cubicle
7. sense_key=cell%1:06:01:: | definition=a room where a prisoner is kept | synonyms=jail cell, prison cell

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content:
The context is about cancer, chromosomes, genetic damage, benign polyps, and malignant cells. This is clearly a biological context referring to the basic structural and functional unit of organisms.

Sense 2: "(biology) the basic structural and functional unit of all organisms; they may exist as independent units of life (as in monads) or may form colonies or tissues as in higher plants and animals"

This is the correct sense.

provider: Inceptron


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: polyp
Target surface form: polyps
Context:
His was one of two research teams in 1984 to report dual chromosome losses for a rare childhood cancer of the kidney called Wilm's tumor. Dr. Vogelstein next turned his attention colon cancer, the second biggest cancer killer in the U.S. after lung cancer. He believed colon cancer might also arise from multiple "hits "on cancer suppressor genes, because it often seems to develop in stages. It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both <t>polyps</t> and malignant cells. Gradually, a coherent picture of cancer development emerged.

Candidate senses:
1. sense_key=polyp%1:26:00:: | definition=a small vascular growth on the surface of a mucous membrane | synonyms=polypus
2. sense_key=polyp%1:05:00:: | definition=one of two forms that coelenterates take (e.g. a hydra or coral): usually sedentary with a hollow cylindrical body usually with a ring of tentacles around the mouth | examples=in some species of coelenterate, polyps are a phase in the life cycle that alternates with a medusoid phase

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content: The context discusses colon cancer, bowel, and malignant cells. "Polyps" here refers to abnormal growths on the mucous membrane (colon/bowel). This matches sense 1: "a small vascular growth on the surface of a mucous membrane."


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: cell
Target surface form: cells
Context:
His was one of two research teams in 1984 to report dual chromosome losses for a rare childhood cancer of the kidney called Wilm's tumor. Dr. Vogelstein next turned his attention colon cancer, the second biggest cancer killer in the U.S. after lung cancer. He believed colon cancer might also arise from multiple "hits "on cancer suppressor genes, because it often seems to develop in stages. It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant <t>cells</t>. Gradually, a coherent picture of cancer development emerged.

Candidate senses:
1. sense_key=cell%1:06:03:: | definition=any small compartment | examples=the cells of a honeycomb
2. sense_key=cell%1:03:00:: | definition=(biology) the basic structural and functional unit of all organisms; they may exist as independent units of life (as in monads) or may form colonies or tissues as in higher plants and animals
3. sense_key=cell%1:06:00:: | definition=a device that delivers an electric current as the result of a chemical reaction | synonyms=electric cell
4. sense_key=cell%1:14:00:: | definition=a small unit serving as part of or as the nucleus of a larger political movement | synonyms=cadre
5. sense_key=cell%1:06:04:: | definition=a hand-held mobile radiotelephone for use in an area divided into small sections, each with its own short-range transmitter/receiver | synonyms=cellular telephone, cellular phone, cellphone, mobile phone
6. sense_key=cell%1:06:02:: | definition=small room in which a monk or nun lives | synonyms=cubicle
7. sense_key=cell%1:06:01:: | definition=a room where a prisoner is kept | synonyms=jail cell, prison cell

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content:
The context is about cancer research, specifically about "malignant cells" and "polyps". This is clearly about biological cells - the basic structural and functional unit of organisms. The text discusses genetic deletions in "benign polyps" and "malignant cells."

Sense 2 is the biology sense: "(biology) the basic structural and functional unit of all organisms; they may exist as independent units of life (as in monads) or may form colonies or tissues as in higher plants and animals"

This is the correct sense.


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: coherent
Target surface form: coherent
Context:
Dr. Vogelstein next turned his attention colon cancer, the second biggest cancer killer in the U.S. after lung cancer. He believed colon cancer might also arise from multiple "hits "on cancer suppressor genes, because it often seems to develop in stages. It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant cells. Gradually, a <t>coherent</t> picture of cancer development emerged. If both copies of a certain gene were knocked out, benign polyps would develop.

Candidate senses:
1. sense_key=coherent%3:00:00:: | definition=marked by an orderly, logical, and aesthetically consistent relation of parts | synonyms=consistent, logical, ordered | examples=a coherent argument
2. sense_key=coherent%5:00:00:rational:00 | definition=capable of thinking and expressing yourself in a clear and consistent manner | synonyms=logical, lucid | examples=a lucid thinker; she was more coherent than she had been just after the accident
3. sense_key=coherent%3:00:01:: | definition=(physics) of waves having a constant phase relation
4. sense_key=coherent%5:00:00:adhesive:00 | definition=sticking together | synonyms=tenacious | examples=two coherent sheets; tenacious burrs

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content:
The context is about Dr. Vogelstein gradually piecing together genetic deletions to form a "coherent picture" of cancer development.
The word "coherent" here means logically ordered or consistent, so that the parts fit together to make sense.
Let's look at the senses:
1. sense_key=coherent%3:00:00:: | definition=marked by an orderly, logical, and aesthetically consistent relation of parts | synonyms=consistent, logical, ordered | examples=a coherent argument
2. sense_key=coherent%5:00:00:rational:00 | definition=capable of thinking and expressing yourself in a clear and consistent manner
3. sense_key=coherent%3:00:01:: | definition=(physics) of waves having a constant phase relation
4. sense_key=coherent%5:00:00:adhesive:00 | definition=sticking together

"coherent picture" fits sense 1 perfectly. It describes an orderly, logical relation of the parts (the confusing variety of genetic deletions) forming a whole picture.
Therefore, sense 1 is the correct choice.


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: picture
Target surface form: picture
Context:
Dr. Vogelstein next turned his attention colon cancer, the second biggest cancer killer in the U.S. after lung cancer. He believed colon cancer might also arise from multiple "hits "on cancer suppressor genes, because it often seems to develop in stages. It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant cells. Gradually, a coherent <t>picture</t> of cancer development emerged. If both copies of a certain gene were knocked out, benign polyps would develop.

Candidate senses:
1. sense_key=picture%1:06:00:: | definition=a visual representation (of an object or scene or person or abstraction) produced on a surface | synonyms=image, icon, ikon | examples=they showed us the pictures of their wedding; a movie is a series of images projected so rapidly that the eye integrates them
2. sense_key=picture%1:06:01:: | definition=graphic art consisting of an artistic composition made by applying paints to a surface | synonyms=painting | examples=a small painting by Picasso; he bought the painting as an investment
3. sense_key=picture%1:09:00:: | definition=a clear and telling mental image | synonyms=mental picture, impression | examples=he described his mental picture of his assailant; he had no clear picture of himself or his world
4. sense_key=picture%1:26:00:: | definition=a situation treated as an observable object | synonyms=scene | examples=the political picture is favorable; the religious scene in England has changed in the last century
5. sense_key=picture%1:10:00:: | definition=illustrations used to decorate or explain a text | synonyms=pictorial matter | examples=the dictionary had many pictures
6. sense_key=picture%1:10:02:: | definition=a form of entertainment that enacts a story by sound and a sequence of images giving the illusion of continuous movement | synonyms=movie, film, moving picture, moving-picture show, motion picture, motion-picture show | examples=they went to a movie every Saturday night; the film was shot on location
7. sense_key=picture%1:10:01:: | definition=the visible part of a television transmission | synonyms=video | examples=they could still receive the sound but the picture was gone
8. sense_key=picture%1:10:03:: | definition=a graphic or vivid verbal description | synonyms=word picture, word-painting, delineation, depiction, characterization, characterisation | examples=too often the narrative was interrupted by long word pictures; the author gives a depressing picture of life in Poland
9. sense_key=picture%1:09:01:: | definition=a typical example of some state or quality | examples=the very picture of a modern general; she was the picture of despair
10. sense_key=picture%1:06:02:: | definition=a representation of a person or scene in the form of a print or transparent slide; recorded by a camera on light-sensitive material | synonyms=photograph, photo, exposure, pic

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content:
The context is about a coherent understanding or model of cancer development emerging from research. "Gradually, a coherent picture of cancer development emerged."

This is about a mental understanding/concept of how cancer develops, not a literal visual image.

Looking at the senses:
- Sense 3: "a clear and telling mental image" - synonyms: mental picture, impression. Example: "he had no clear picture of himself or his world"
- Sense 4: "a situation treated as an observable object" - synonyms: scene. Example: "the political picture is favorable"

The phrase "a coherent picture of cancer development emerged" suggests an understanding or mental model. This fits sense 3 (mental image/impression) or sense 4 (situation treated as observable object).

Sense 4's example "the political picture is favorable" is about a situation being described. But here, "a coherent picture of cancer development emerged" is more about a mental understanding/conception that became clear through research.

Sense 3 seems best: "a clear and telling mental image" with synonyms "mental picture, impression". The example "he had no clear picture of himself or his world" is very close to "a coherent picture of cancer development emerged."

I'll go with sense 3.


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: cancer
Target surface form: cancer
Context:
Dr. Vogelstein next turned his attention colon cancer, the second biggest cancer killer in the U.S. after lung cancer. He believed colon cancer might also arise from multiple "hits "on cancer suppressor genes, because it often seems to develop in stages. It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant cells. Gradually, a coherent picture of <t>cancer</t> development emerged. If both copies of a certain gene were knocked out, benign polyps would develop.

Candidate senses:
1. sense_key=cancer%1:26:00:: | definition=any malignant growth or tumor caused by abnormal and uncontrolled cell division; it may spread to other parts of the body through the lymphatic system or the blood stream | synonyms=malignant neoplastic disease
2. sense_key=cancer%1:18:00:: | definition=(astrology) a person who is born while the sun is in Cancer | synonyms=Crab
3. sense_key=cancer%1:17:00:: | definition=a small zodiacal constellation in the northern hemisphere; between Leo and Gemini
4. sense_key=cancer%1:15:00:: | definition=the fourth sign of the zodiac; the sun is in this sign from about June 21 to July 22 | synonyms=Cancer the Crab, Crab
5. sense_key=cancer%1:05:00:: | definition=type genus of the family Cancridae | synonyms=genus Cancer

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content: The target word "cancer" appears in the phrase "a coherent picture of cancer development emerged." The context is about Dr. Vogelstein studying colon cancer, genetic damage, polyps, malignant cells, etc. This is clearly referring to the disease cancer, which is sense 1: "any malignant growth or tumor caused by abnormal and uncontrolled cell division."


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: development
Target surface form: development
Context:
Dr. Vogelstein next turned his attention colon cancer, the second biggest cancer killer in the U.S. after lung cancer. He believed colon cancer might also arise from multiple "hits "on cancer suppressor genes, because it often seems to develop in stages. It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant cells. Gradually, a coherent picture of cancer <t>development</t> emerged. If both copies of a certain gene were knocked out, benign polyps would develop.

Candidate senses:
1. sense_key=development%1:04:01:: | definition=act of improving by expanding or enlarging or refining | examples=he congratulated them on their development of a plan to meet the emergency; they funded research and development
2. sense_key=development%1:22:02:: | definition=a process in which something passes by degrees to a different stage (especially a more advanced or mature stage) | synonyms=evolution | examples=the development of his ideas took many years; the evolution of Greek civilization
3. sense_key=development%1:22:01:: | definition=(biology) the process of an individual organism growing organically; a purely biological unfolding of events involved in an organism changing gradually from a simple to a more complex level | synonyms=growth, growing, maturation, ontogeny, ontogenesis | examples=he proposed an indicator of osseous development in children
4. sense_key=development%1:11:01:: | definition=a recent event that has some relevance for the present situation | examples=recent developments in Iraq; what a revolting development!
5. sense_key=development%1:04:02:: | definition=the act of making some area of land or water more profitable or productive or useful | synonyms=exploitation | examples=the development of Alaskan resources; the exploitation of copper deposits
6. sense_key=development%1:15:00:: | definition=a district that has been developed to serve some purpose | examples=such land is practical for small park developments
7. sense_key=development%1:26:00:: | definition=a state in which things are improving; the result of developing (as in the early part of a game of chess) | examples=after he saw the latest development he changed his mind and became a supporter; in chess your should take care of your development before moving your queen
8. sense_key=development%1:22:00:: | definition=processing a photosensitive material in order to make an image visible | synonyms=developing | examples=the development and printing of his pictures took only two hours
9. sense_key=development%1:10:00:: | definition=(music) the section of a composition or movement (especially in sonata form) where the major musical themes are developed and elaborated

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content:
The target word is "development" in the phrase "cancer development".
The context discusses how cancer arises from multiple "hits" on cancer suppressor genes, developing in stages, progressing from less severe to deadly, a cascade of genetic damage.
The phrase is "Gradually, a coherent picture of cancer development emerged."

Let's evaluate the candidate senses:
1. act of improving by expanding or enlarging or refining (e.g. development of a plan) - Incorrect.
2. a process in which something passes by degrees to a different stage (especially a more advanced or mature stage) | synonyms=evolution. This matches the context of cancer progressing from benign polyps to malignant cells in stages, a cascade of genetic damage.
3. (biology) the process of an individual organism growing organically; a purely biological unfolding of events involved in an organism changing gradually from a simple to a more complex level. The text is about cancer development, which is a biological process, but it refers to the progression of the disease within an organism, passing by degrees to a different stage (malignancy). Sense 2 fits the progression of a disease better than the growth of an individual organism (ontogeny).
4. a recent event - Incorrect.
5. act of making land or water more profitable - Incorrect.
6. a district - Incorrect.
7. state in which things are improving (chess) - Incorrect.
8. processing photosensitive material - Incorrect.
9. music section - Incorrect.

Let's look closer at sense 2 and sense 3.
Sense 2: "a process in which something passes by degrees to a different stage (especially a more advanced or mature stage)" - synonyms: evolution. Example: "the development of his ideas took many years".
Sense 3: "(biology) the process of an individual organism growing organically..." - synonyms: growth, growing, maturation, ontogeny, ontogenesis. Example: "osseous development in children".

The context mentions "a coherent picture of cancer development emerged." The text talks about cancer developing in stages, progressing from less severe to deadly, a cascade of genetic damage. This perfectly matches "a process in which something passes by degrees to a different stage". It's the evolution/development of the cancer itself.

Sense 2 is index 2. Sense 3 is index 3.
"development%1:22:02::" is index 2.
"development%1:22:01::" is index 3.
I will output 2.


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: emerge
Target surface form: emerged
Context:
Dr. Vogelstein next turned his attention colon cancer, the second biggest cancer killer in the U.S. after lung cancer. He believed colon cancer might also arise from multiple "hits "on cancer suppressor genes, because it often seems to develop in stages. It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant cells. Gradually, a coherent picture of cancer development <t>emerged</t>. If both copies of a certain gene were knocked out, benign polyps would develop.

Candidate senses:
1. sense_key=emerge%2:30:00:: | definition=come out into view, as from concealment | examples=Suddenly, the proprietor emerged from his office
2. sense_key=emerge%2:30:02:: | definition=come out of | synonyms=issue, come out, come forth, go forth, egress | examples=Water issued from the hole in the wall; The words seemed to come out by themselves
3. sense_key=emerge%2:30:01:: | definition=become known or apparent | examples=Some nice results emerged from the study
4. sense_key=emerge%2:38:00:: | definition=come up to the surface of or rise | examples=He felt new emotions emerge
5. sense_key=emerge%2:42:00:: | definition=happen or occur as a result of something | synonyms=come forth

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content:
The target lemma is "emerge" and the surface form is "emerged".
The context is about Dr. Vogelstein's research into colon cancer. He and his student probed chromosomes and uncovered genetic deletions. "Gradually, a coherent picture of cancer development emerged."
This means that a clear understanding or picture became known or apparent through the process of research.
Let's look at the senses:
1. emerge%2:30:00:: come out into view, as from concealment (e.g., Suddenly, the proprietor emerged from his office)
2. emerge%2:30:02:: come out of (e.g., Water issued from the hole)
3. emerge%2:30:01:: become known or apparent (e.g., Some nice results emerged from the study)
4. emerge%2:38:00:: come up to the surface of or rise (e.g., He felt new emotions emerge)
5. emerge%2:42:00:: happen or occur as a result of something (synonyms: come forth)

Sense 3 fits perfectly: "a coherent picture of cancer development emerged" = a coherent picture became known or apparent. The example "Some nice results emerged from the study" is closely related to the context of scientific research.

Let's check sense 5. "happen or occur as a result of something". "a coherent picture of cancer development emerged" did emerge as a result of the probing, but "become known or apparent" fits the phrase "a coherent picture emerged" much better.

Therefore, the best sense is 3.


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: copy
Target surface form: copies
Context:
He believed colon cancer might also arise from multiple "hits "on cancer suppressor genes, because it often seems to develop in stages. It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant cells. Gradually, a coherent picture of cancer development emerged. If both <t>copies</t> of a certain gene were knocked out, benign polyps would develop. If both copies of a second gene were then deleted, the polyps would progress to malignancy.

Candidate senses:
1. sense_key=copy%1:10:00:: | definition=a reproduction of a written record (e.g. of a legal or school record) | synonyms=transcript
2. sense_key=copy%1:06:00:: | definition=a thing made to be similar or identical to another thing | examples=she made a copy of the designer dress; the clone was a copy of its ancestor
3. sense_key=copy%1:10:01:: | definition=matter to be printed; exclusive of graphical materials | synonyms=written matter
4. sense_key=copy%1:10:02:: | definition=material suitable for a journalistic account | examples=catastrophes make good copy

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content: The context is about genetics, chromosomes, and genes. Specifically, "If both copies of a certain gene were knocked out." Here "copies" refers to the two copies of a gene (one from each parent). This is about biological copies, things made to be similar or identical to another thing. Sense 2 defines "a thing made to be similar or identical to another thing" with examples like "the clone was a copy of its ancestor." This fits the biological context where genes have multiple copies (alleles).

provider: Venice


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: certain
Target surface form: certain
Context:
He believed colon cancer might also arise from multiple "hits "on cancer suppressor genes, because it often seems to develop in stages. It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant cells. Gradually, a coherent picture of cancer development emerged. If both copies of a <t>certain</t> gene were knocked out, benign polyps would develop. If both copies of a second gene were then deleted, the polyps would progress to malignancy.

Candidate senses:
1. sense_key=certain%5:00:00:definite:00 | definition=definite but not specified or identified | examples=set aside a certain sum each week; to a certain degree
2. sense_key=certain%3:00:02:: | definition=having or feeling no doubt or uncertainty; confident and assured | synonyms=sure | examples=felt certain of success; was sure (or certain) she had seen it
3. sense_key=certain%3:00:01:: | definition=established beyond doubt or question; definitely known | examples=what is certain is that every effect must have a cause; it is certain that they were on the bus
4. sense_key=certain%3:00:03:: | definition=certain to occur; destined or inevitable; ; ; - Benjamin Franklin | synonyms=sure | examples=he was certain to fail; his fate is certain
5. sense_key=certain%3:00:05:: | definition=established irrevocably | synonyms=sealed | examples=his fate is sealed
6. sense_key=certain%5:00:00:reliable:00 | definition=reliable in operation or effect | synonyms=sure | examples=a quick and certain remedy; a sure way to distinguish the two
7. sense_key=certain%5:00:00:careful:00 | definition=exercising or taking care great enough to bring assurance | synonyms=sure | examples=be certain to disconnect the iron when you are through; be sure to lock the doors

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content:
The context is: "If both copies of a certain gene were knocked out, benign polyps would develop."

Here, "certain" modifies "gene." It means a specific but unspecified gene. The phrase "a certain gene" refers to some particular gene that is definite but not specifically named or identified in this sentence.

Sense 1: "definite but not specified or identified" with examples "set aside a certain sum each week; to a certain degree"

This matches perfectly. "A certain gene" means a particular, definite gene, but not specified by name.

Sense 2 is about being confident/assured (feeling certain). Not applicable here.
Sense 3 is about established beyond doubt. Not applicable here.
Sense 4 is about being destined/inevitable. Not applicable.
Sense 5 is about established irrevocably. Not applicable.
Sense 6 is about reliable in operation. Not applicable.
Sense 7 is about taking care. Not applicable.

The answer is sense 1.


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: knock_out
Target surface form: knocked out
Context:
He believed colon cancer might also arise from multiple "hits "on cancer suppressor genes, because it often seems to develop in stages. It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant cells. Gradually, a coherent picture of cancer development emerged. If both copies of a certain gene were <t>knocked out</t>, benign polyps would develop. If both copies of a second gene were then deleted, the polyps would progress to malignancy.

Candidate senses:
1. sense_key=knock_out%2:30:01:: | definition=eliminate | examples=knock out a target
2. sense_key=knock_out%2:35:00:: | definition=knock unconscious or senseless | synonyms=knock cold, kayo | examples=the boxing champion knocked out his opponent in a few seconds
3. sense_key=knock_out%2:30:00:: | definition=destroy or break forcefully | examples=The windows were knocked out
4. sense_key=knock_out%2:37:00:: | definition=overwhelm with admiration | examples=All the guys were knocked out by her charm
5. sense_key=knock_out%2:30:02:: | definition=empty (as of tobacco) by knocking out | examples=knocked out a pipe

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content:
The context is about colon cancer and genetic damage. The sentence says "If both copies of a certain gene were knocked out, benign polyps would develop." This is using "knocked out" in the sense of eliminating or destroying the gene's function. In genetics, "knocking out" a gene means eliminating its function.

Sense 1: eliminate | examples=knock out a target - This fits well with eliminating gene function.
Sense 2: knock unconscious - doesn't fit
Sense 3: destroy or break forcefully - could fit but it's more about physical breaking
Sense 4: overwhelm with admiration - doesn't fit
Sense 5: empty by knocking out - doesn't fit

The genetic context of "knocking out" genes aligns with eliminating the gene function. Sense 1 "eliminate" with example "knock out a target" is the best fit.


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: polyp
Target surface form: polyps
Context:
He believed colon cancer might also arise from multiple "hits "on cancer suppressor genes, because it often seems to develop in stages. It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant cells. Gradually, a coherent picture of cancer development emerged. If both copies of a certain gene were knocked out, benign <t>polyps</t> would develop. If both copies of a second gene were then deleted, the polyps would progress to malignancy.

Candidate senses:
1. sense_key=polyp%1:26:00:: | definition=a small vascular growth on the surface of a mucous membrane | synonyms=polypus
2. sense_key=polyp%1:05:00:: | definition=one of two forms that coelenterates take (e.g. a hydra or coral): usually sedentary with a hollow cylindrical body usually with a ring of tentacles around the mouth | examples=in some species of coelenterate, polyps are a phase in the life cycle that alternates with a medusoid phase

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content:
The context is clearly about medical/biological context related to colon cancer, bowel, benign and malignant polyps.
The target word is "polyps".
Candidate sense 1: a small vascular growth on the surface of a mucous membrane (polypus).
Candidate sense 2: one of two forms that coelenterates take.

Sense 1 is the correct medical sense for colon polyps.
Sense 2 is the zoological sense.

Therefore, sense_index should be 1.


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: develop
Target surface form: develop
Context:
He believed colon cancer might also arise from multiple "hits "on cancer suppressor genes, because it often seems to develop in stages. It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant cells. Gradually, a coherent picture of cancer development emerged. If both copies of a certain gene were knocked out, benign polyps would <t>develop</t>. If both copies of a second gene were then deleted, the polyps would progress to malignancy.

Candidate senses:
1. sense_key=develop%2:36:01:: | definition=make something new, such as a product or a mental or artistic creation | examples=Her company developed a new kind of building material that withstands all kinds of weather; They developed a new technique
2. sense_key=develop%2:36:00:: | definition=work out | synonyms=evolve, germinate | examples=We have developed a new theory of evolution
3. sense_key=develop%2:30:06:: | definition=gain through experience | synonyms=acquire, evolve | examples=I acquired a strong aversion to television; Children must develop a sense of right and wrong
4. sense_key=develop%2:29:00:: | definition=come to have or undergo a change of (physical features and attributes) | synonyms=grow, produce, get, acquire | examples=He grew a beard; The patient developed abdominal pains
5. sense_key=develop%2:42:00:: | definition=come into existence; take on form or shape | synonyms=originate, arise, rise, uprise, spring up, grow | examples=A new religious movement originated in that country; a love that sprang up from friendship
6. sense_key=develop%2:30:04:: | definition=change the use of and make available or usable | synonyms=build up | examples=develop land; The country developed its natural resources
7. sense_key=develop%2:32:00:: | definition=elaborate, as of theories and hypotheses | synonyms=explicate, formulate | examples=Could you develop the ideas in your thesis
8. sense_key=develop%2:31:00:: | definition=create by training and teaching | synonyms=train, prepare, educate | examples=The old master is training world-class violinists; we develop the leaders for the future
9. sense_key=develop%2:30:05:: | definition=be gradually disclosed or unfolded; become manifest | examples=The plot developed slowly
10. sense_key=develop%2:30:00:: | definition=grow, progress, unfold, or evolve through a process of evolution, natural growth, differentiation, or a conducive environment | examples=A flower developed on the branch; The country developed into a mighty superpower
11. sense_key=develop%2:30:09:: | definition=become technologically advanced | synonyms=modernize, modernise | examples=Many countries in Asia are now developing at a very fast pace; Viet Nam is modernizing rapidly
12. sense_key=develop%2:30:01:: | definition=cause to grow and differentiate in ways conforming to its natural development | synonyms=make grow | examples=The perfect climate here develops the grain; He developed a new kind of apple
13. sense_key=develop%2:36:09:: | definition=generate gradually | examples=We must develop more potential customers; develop a market for the new mobile phone
14. sense_key=develop%2:30:10:: | definition=grow emotionally or mature | synonyms=grow | examples=The child developed beautifully in her new kindergarten; When he spent a summer at camp, the boy grew noticeably and no longer showed some of his old adolescent behavior
15. sense_key=develop%2:39:00:: | definition=make visible by means of chemical solutions | examples=Please develop this roll of film for me
16. sense_key=develop%2:35:04:: | definition=superimpose a three-dimensional surface on a plane without stretching, in geometry
17. sense_key=develop%2:33:03:: | definition=move one's pieces into strategically more advantageous positions | examples=Spassky developed quickly
18. sense_key=develop%2:33:02:: | definition=move into a strategically more advantageous position | examples=develop the rook
19. sense_key=develop%2:30:13:: | definition=elaborate by the unfolding of a musical idea and by the working out of the rhythmic and harmonic changes in the theme | examples=develop the melody and change the key
20. sense_key=develop%2:30:03:: | definition=happen | synonyms=break, recrudesce | examples=Report the news as it develops; These political movements recrudesce from time to time
21. sense_key=develop%2:30:12:: | definition=expand in the form of a series | examples=Develop the function in the following form

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content:
The target sentence is: "If both copies of a certain gene were knocked out, benign polyps would <t>develop</t>."

This means "benign polyps would come into existence" or "grow" as a result of the gene being knocked out. The context is about cancer development in stages, where genetic changes lead to the formation/growth of polyps.

Looking at the candidates:

- Sense 5: "come into existence; take on form or shape" - synonyms: originate, arise, rise, uprise, spring up, grow. This fits well: "benign polyps would come into existence."
- Sense 10: "grow, progress, unfold, or evolve through a process of evolution, natural growth, differentiation, or a conducive environment" - examples: "A flower developed on the branch; The country developed into a mighty superpower." This also could fit.
- Sense 4: "come to have or undergo a change of (physical features and attributes)" - examples: "He grew a beard; The patient developed abdominal pains." This is transitive/causative usually.

The sentence "benign polyps would develop" is intransitive - the polyps themselves develop (come into existence).

Sense 5 says "come into existence; take on form or shape" with synonyms like "originate, arise, spring up, grow." This seems to match best - the polyps would arise/come into existence.

But let me also consider sense 10: "grow, progress, unfold, or evolve through a process of evolution, natural growth, differentiation." The example "A flower developed on the branch" is similar - something biological growing.

Hmm, the context emphasizes the cancer "arising" from hits on genes, and developing "in stages." The polyps developing is about them coming into existence as a result of gene knockout.

Sense 5 emphasizes "come into existence; take on form or shape" which fits the idea of polyps forming/arising.

Sense 10 emphasizes growth through evolution/natural growth/differentiation - which is more about an existing thing growing and changing.

The polyps would "develop" - they would come into existence/form. Sense 5 seems most appropriate.

Actually, let me reconsider. The earlier context says "it often seems to develop in stages" referring to colon cancer developing. And "a coherent picture of cancer development emerged." The word "develop" here is about a biological process of something coming into being and progressing.

Sense 10: "grow, progress, unfold, or evolve through a process of evolution, natural growth, differentiation, or a conducive environment" - this captures the biological growth aspect.

But for "benign polyps would develop" specifically - this is about polyps coming into existence/forming.

Sense 5: "come into existence; take on form or shape" - "A new religious movement originated in that country; a love that sprang up from friendship"

I think sense 5 is the best fit because the polyps are coming into existence (forming) as a result of the gene knockout. They're not just growing/progressing from an existing state - they're arising.

Wait, but let me reconsider again. The whole passage is about cancer developing in stages, and the biological process of growth. "Develop" in medical contexts often means "come to have or undergo a change" (sense 4) but that's usually transitive. Here it's intransitive.

Actually, in medical contexts, "develop" is often used intransitively to mean something arises or comes into being. "The patient developed a rash" - here the rash comes into existence. Similarly, "benign polyps would develop" - the polyps would come into existence.

Sense 5: "come into existence; take on form or shape" fits this well.

Sense 10: "grow, progress, unfold, or evolve through a process of evolution, natural growth, differentiation, or a conducive environment" - this is more about gradual growth and evolution.

The sentence says "If both copies of a certain gene were knocked out, benign polyps would develop." This is a causal relationship - the gene knockout causes polyps to form/come into existence. Sense 5 captures "come into existence" best.

I'll go with sense 5.


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: copy
Target surface form: copies
Context:
It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant cells. Gradually, a coherent picture of cancer development emerged. If both copies of a certain gene were knocked out, benign polyps would develop. If both <t>copies</t> of a second gene were then deleted, the polyps would progress to malignancy. It was clear that more than one gene had to be damaged for colon cancer to develop.

Candidate senses:
1. sense_key=copy%1:10:00:: | definition=a reproduction of a written record (e.g. of a legal or school record) | synonyms=transcript
2. sense_key=copy%1:06:00:: | definition=a thing made to be similar or identical to another thing | examples=she made a copy of the designer dress; the clone was a copy of its ancestor
3. sense_key=copy%1:10:01:: | definition=matter to be printed; exclusive of graphical materials | synonyms=written matter
4. sense_key=copy%1:10:02:: | definition=material suitable for a journalistic account | examples=catastrophes make good copy

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content:
The context discusses genetics: "If both copies of a certain gene were knocked out" and "If both copies of a second gene were then deleted."

Here, "copies" refers to the two copies of a gene (one from each parent). These are things made to be similar or identical to another thing - the gene copies.

Sense 2: "a thing made to be similar or identical to another thing" with examples like "the clone was a copy of its ancestor" fits best. In genetics, individuals have two copies of each gene (one on each chromosome of a pair), and these are essentially identical/similar copies.

The other senses relate to written records, printed matter, or journalistic material, none of which fit the biological context.

So the answer is sense 2.


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: second
Target surface form: second
Context:
It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant cells. Gradually, a coherent picture of cancer development emerged. If both copies of a certain gene were knocked out, benign polyps would develop. If both copies of a <t>second</t> gene were then deleted, the polyps would progress to malignancy. It was clear that more than one gene had to be damaged for colon cancer to develop.

Candidate senses:
1. sense_key=second%5:00:00:ordinal:00 | definition=coming next after the first in position in space or time or degree or magnitude | synonyms=2nd, 2d
2. sense_key=second%3:00:00:: | definition=a part or voice or instrument or orchestra section lower in pitch than or subordinate to the first | examples=second flute; the second violins

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content: The target word "second" is used as an adjective modifying "gene" in the phrase "a second gene." It means the next one after the first, i.e., coming next after the first in position. This corresponds to sense 1.


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: then
Target surface form: then
Context:
It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant cells. Gradually, a coherent picture of cancer development emerged. If both copies of a certain gene were knocked out, benign polyps would develop. If both copies of a second gene were <t>then</t> deleted, the polyps would progress to malignancy. It was clear that more than one gene had to be damaged for colon cancer to develop.

Candidate senses:
1. sense_key=then%4:02:00:: | definition=subsequently or soon afterward (often used as sentence connectors) | synonyms=so, and so, and then | examples=then he left; go left first, then right
2. sense_key=then%4:02:02:: | definition=in that case or as a consequence | examples=if he didn't take it, then who did?; keep it then if you want to
3. sense_key=then%4:02:01:: | definition=at that time | examples=I was young then; prices were lower back then

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content:
The target word is "then" in the context: "If both copies of a second gene were then deleted, the polyps would progress to malignancy."

Let me analyze the context. The passage describes a sequential process:
1. First, both copies of a certain gene are knocked out → benign polyps develop
2. Then (subsequently/afterward), both copies of a second gene are deleted → polyps progress to malignancy

The word "then" here is used to indicate a temporal sequence - something happening subsequently or after the first event. It's describing that after the first gene knockout, the deletion of a second gene follows.

Sense 1: "subsequently or soon afterward" - examples: "then he left; go left first, then right" - This fits the sequential progression described.

Sense 2: "in that case or as a consequence" - examples: "if he didn't take it, then who did?; keep it then if you want to" - This is more about logical consequence/conditional reasoning.

Sense 3: "at that time" - examples: "I was young then; prices were lower back then" - This refers to a specific point in time in the past.

The context here describes a sequence of events: first one gene is knocked out, then (subsequently/afterward) a second gene is deleted. This is clearly about temporal sequence - "subsequently or soon afterward."

The answer is sense 1.


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: delete
Target surface form: deleted
Context:
It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant cells. Gradually, a coherent picture of cancer development emerged. If both copies of a certain gene were knocked out, benign polyps would develop. If both copies of a second gene were then <t>deleted</t>, the polyps would progress to malignancy. It was clear that more than one gene had to be damaged for colon cancer to develop.

Candidate senses:
1. sense_key=delete%2:35:00:: | definition=remove or make invisible | synonyms=cancel | examples=Please delete my name from your list
2. sense_key=delete%2:32:00:: | definition=wipe out digitally or magnetically recorded information | synonyms=erase | examples=Who erased the files form my hard disk?
3. sense_key=delete%2:30:00:: | definition=cut or eliminate | synonyms=edit, blue-pencil | examples=she edited the juiciest scenes

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

raw_output:
```json
{"sense_index": 1}
```

content:
```json
{"sense_index": 1}
```

reasoning_content:
The context is about genetics and cancer development. The target word "deleted" is used to describe what happens to genes: "If both copies of a second gene were then deleted, the polyps would progress to malignancy." This refers to genetic deletions - the loss or removal of genetic material (genes) from chromosomes.

Looking at the candidate senses:
1. delete%2:35:00:: - remove or make invisible (synonyms: cancel)
2. delete%2:32:00:: - wipe out digitally or magnetically recorded information (synonyms: erase)
3. delete%2:30:00:: - cut or eliminate (synonyms: edit, blue-pencil)

Sense 2 is about digital/magnetic recording - not applicable here.
Sense 3 is about editing text - not applicable here.
Sense 1 is about removing or making invisible - this is the most general sense and fits best with the idea of genes being removed/eliminated from chromosomes.

The context talks about "genetic deletions" - the removal of genetic material. Sense 1, "remove or make invisible," is the most appropriate general sense for this usage.


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: polyp
Target surface form: polyps
Context:
It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant cells. Gradually, a coherent picture of cancer development emerged. If both copies of a certain gene were knocked out, benign polyps would develop. If both copies of a second gene were then deleted, the <t>polyps</t> would progress to malignancy. It was clear that more than one gene had to be damaged for colon cancer to develop.

Candidate senses:
1. sense_key=polyp%1:26:00:: | definition=a small vascular growth on the surface of a mucous membrane | synonyms=polypus
2. sense_key=polyp%1:05:00:: | definition=one of two forms that coelenterates take (e.g. a hydra or coral): usually sedentary with a hollow cylindrical body usually with a ring of tentacles around the mouth | examples=in some species of coelenterate, polyps are a phase in the life cycle that alternates with a medusoid phase

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content: The context discusses polyps in the bowel, benign polyps, malignant cells, colon cancer development. This is clearly about the medical/ anatomical sense of polyp - a small vascular growth on the surface of a mucous membrane.


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: malignancy
Target surface form: malignancy
Context:
It often is preceded by the development of polyps in the bowel, which in some cases become increasingly malignant in identifiable stages -- progressing from less severe to deadly -- as though a cascade of genetic damage might be occurring. Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant cells. Gradually, a coherent picture of cancer development emerged. If both copies of a certain gene were knocked out, benign polyps would develop. If both copies of a second gene were then deleted, the polyps would progress to <t>malignancy</t>. It was clear that more than one gene had to be damaged for colon cancer to develop.

Candidate senses:
1. sense_key=malignancy%1:26:00:: | definition=(medicine) a malignant state; progressive and resistant to treatment and tending to cause death | synonyms=malignance
2. sense_key=malignancy%1:07:00:: | definition=quality of being disposed to evil; intense ill will | synonyms=malignity, malignance

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content:
The context discusses cancer development, polyps becoming malignant, genetic damage, and the progression to "malignancy" in the context of colon cancer. The word "malignancy" here refers to a medical condition related to cancer.

Sense 1: (medicine) a malignant state; progressive and resistant to treatment and tending to cause death
Sense 2: quality of being disposed to evil; intense ill will

The context is clearly medical, discussing cancer, polyps, and genetic damage. The correct sense is 1.


[System] You are an English linguist performing fine-grained Word Sense Disambiguation. WordNet glosses are schematic. Use the sentence context, the examples, and the synonyms to choose the best indexed sense. Do not hedge. Choose the single best indexed sense.

[User]
Target lemma: clear
Target surface form: clear
Context:
Dr. Vogelstein and a doctoral student, Eric Fearon, began months of tedious and often frustrating probing of the chromosomes searching for signs of genetic damage. They began uncovering a confusing variety of genetic deletions, some existing only in benign polyps, others in malignant cells and many in both polyps and malignant cells. Gradually, a coherent picture of cancer development emerged. If both copies of a certain gene were knocked out, benign polyps would develop. If both copies of a second gene were then deleted, the polyps would progress to malignancy. It was <t>clear</t> that more than one gene had to be damaged for colon cancer to develop. Their report galvanized other molecular biologists.

Candidate senses:
1. sense_key=clear%3:00:00:: | definition=readily apparent to the mind | examples=a clear and present danger; a clear explanation
2. sense_key=clear%5:00:00:clearheaded:00 | definition=free from confusion or doubt | examples=a complex problem requiring a clear head; not clear about what is expected of us
3. sense_key=clear%5:00:00:unobstructed:00 | definition=affording free passage or view | synonyms=open | examples=a clear view; a clear path to victory
4. sense_key=clear%3:00:02:: | definition=allowing light to pass through | examples=clear water; clear plastic bags
5. sense_key=clear%5:00:02:free:00 | definition=free from contact or proximity or connection | examples=we were clear of the danger; the ship was clear of the reef
6. sense_key=clear%5:00:00:untroubled:00 | definition=characterized by freedom from troubling thoughts (especially guilt) | examples=a clear conscience; regarded her questioner with clear untroubled eyes
7. sense_key=clear%5:00:01:pure:02 | definition=(of sound or color) free from anything that dulls or dims | synonyms=clean, light, unclouded | examples=efforts to obtain a clean bass in orchestral recordings; clear laughter like a waterfall
8. sense_key=clear%5:00:00:unencumbered:00 | definition=(especially of a title) free from any encumbrance or limitation that presents a question of fact or law | synonyms=unmortgaged | examples=I have clear title to this property
9. sense_key=clear%5:00:00:distinct:00 | definition=clear and distinct to the senses; easily perceptible | synonyms=clean-cut, clear-cut | examples=as clear as a whistle; clear footprints in the snow
10. sense_key=clear%3:00:04:: | definition=accurately stated or described | synonyms=well-defined | examples=a set of well-defined values
11. sense_key=clear%3:00:03:: | definition=free from clouds or mist or haze | examples=on a clear day
12. sense_key=clear%5:00:00:unqualified:02 | definition=free of restrictions or qualifications | synonyms=clean | examples=a clean bill of health; a clear winner
13. sense_key=clear%5:00:00:perfect:00 | definition=free from flaw or blemish or impurity | examples=a clear perfect diamond; the clear complexion of a healthy young woman
14. sense_key=clear%5:00:00:net:00 | definition=clear of charges or deductions | examples=a clear profit
15. sense_key=clear%5:00:00:legible:00 | definition=easily deciphered | synonyms=decipherable, readable
16. sense_key=clear%5:00:00:innocent:00 | definition=freed from any question of guilt | synonyms=absolved, cleared, exculpated, exonerated, vindicated | examples=is absolved from all blame; was now clear of the charge of cowardice
17. sense_key=clear%5:00:00:discerning:00 | definition=characterized by ease and quickness in perceiving | synonyms=percipient | examples=clear mind; a percipient author

Instructions:
1. Choose the single best indexed sense for the target word in context.
2. WordNet glosses are schematic; use the context, synonyms, and examples together.
3. Do not answer with a WordNet sense key.
4. Return only a JSON object exactly like {"sense_index": 3}.

reasoning_content:
The context is: "It was clear that more than one gene had to be damaged for colon cancer to develop."

Here, "clear" means that the conclusion was readily apparent to the mind - it was obvious/evident from the research findings. The researchers uncovered information and gradually a coherent picture emerged, making it clear (apparent/obvious) that more than one gene had to be damaged.

Sense 1: "readily apparent to the mind" - examples: "a clear and present danger", "a clear explanation"
Sense 2: "free from confusion or doubt" - examples: "a complex problem requiring a clear head", "not clear about what is expected of us"

The sentence "It was clear that..." is a common construction meaning "It was readily apparent/evident that..." This aligns best with sense 1.

Sense 2 is about a person being free from confusion or doubt (having a "clear head" or being "clear about" something). The construction "It was clear that..." is more about the apparentness of a fact rather than a person's mental state of being free from doubt.

So the best sense is sense 1.

provider: AkashML